Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-590-3p in CA Breast Richardson Cluster 7 Table contains all genes in the CA Breast Richardson cluster number 7. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-590-3p 25879 DCAF13 DDB1 and CUL4 associated factor 13 [Source:HGNC Symbol;Acc:24535] zzz999 84079 ANKRD27 ankyrin repeat domain 27 (VPS9 domain) [Source:HGNC Symbol;Acc:25310] zzz999 55737 VPS35 vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:13487] P T 140739 UBE2F ubiquitin-conjugating enzyme E2F (putative) [Source:HGNC Symbol;Acc:12480] zzz999 1537 CYC1 cytochrome c-1 [Source:HGNC Symbol;Acc:2579] zzz999 23204 ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 [Source:HGNC Symbol;Acc:697] T 79794 C12orf49 chromosome 12 open reading frame 49 [Source:HGNC Symbol;Acc:26128] P T 6156 RPL30 ribosomal protein L30 [Source:HGNC Symbol;Acc:10333] T 23212 RRS1 RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:17083] zzz999 55322 C5orf22 chromosome 5 open reading frame 22 [Source:HGNC Symbol;Acc:25639] T 5885 RAD21 RAD21 homolog (S. pombe) [Source:HGNC Symbol;Acc:9811] P T 84933 C8orf76 chromosome 8 open reading frame 76 [Source:HGNC Symbol;Acc:25924] zzz999 51110 LACTB2 lactamase, beta 2 [Source:HGNC Symbol;Acc:18512] T 51371 POMP proteasome maturation protein [Source:HGNC Symbol;Acc:20330] T 9183 ZW10 ZW10, kinetochore associated, homolog (Drosophila) [Source:HGNC Symbol;Acc:13194] zzz999 80143 SIKE1 suppressor of IKBKE 1 [Source:HGNC Symbol;Acc:26119] T 5440 POLR2K polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa [Source:HGNC Symbol;Acc:9198] zzz999 51315 KRCC1 lysine-rich coiled-coil 1 [Source:HGNC Symbol;Acc:28039] zzz999 400 ARL1 ADP-ribosylation factor-like 1 [Source:HGNC Symbol;Acc:692] T 10940 POP1 processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae) [Source:HGNC Symbol;Acc:30129] T 51337 C8orf55 chromosome 8 open reading frame 55 [Source:HGNC Symbol;Acc:29656] zzz999 51575 ESF1 ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:15898] T 160897 GPR180 G protein-coupled receptor 180 [Source:HGNC Symbol;Acc:28899] T 7336 UBE2V2 ubiquitin-conjugating enzyme E2 variant 2 [Source:HGNC Symbol;Acc:12495] zzz999 5713 PSMD7 proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 [Source:HGNC Symbol;Acc:9565] zzz999 55156 ARMC1 armadillo repeat containing 1 [Source:HGNC Symbol;Acc:17684] T 2673 GFPT1 glutamine--fructose-6-phosphate transaminase 1 [Source:HGNC Symbol;Acc:4241] zzz999 79568 C2orf47 chromosome 2 open reading frame 47 [Source:HGNC Symbol;Acc:26198] zzz999 89978 ATPBD4 ATP binding domain 4 [Source:HGNC Symbol;Acc:30543] T 6873 TAF2 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa [Source:HGNC Symbol;Acc:11536] T 58500 ZNF250 zinc finger protein 250 [Source:HGNC Symbol;Acc:13044] T 63939 C20orf177 chromosome 20 open reading frame 177 [Source:HGNC Symbol;Acc:16170] T 4072 EPCAM epithelial cell adhesion molecule [Source:HGNC Symbol;Acc:11529] T 321 APBA2 amyloid beta (A4) precursor protein-binding, family A, member 2 [Source:HGNC Symbol;Acc:579] zzz999 4709 NDUFB3 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa [Source:HGNC Symbol;Acc:7698] zzz999 9694 TTC35 tetratricopeptide repeat domain 35 [Source:HGNC Symbol;Acc:28963] zzz999 27085 MTBP Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (mouse) binding protein, 104kDa [Source:HGNC Symbol;Acc:7417] T 8836 GGH gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) [Source:HGNC Symbol;Acc:4248] zzz999 55299 BRIX1 BRX1, biogenesis of ribosomes, homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:24170] T 79913 ACTR5 ARP5 actin-related protein 5 homolog (yeast) [Source:HGNC Symbol;Acc:14671] T 10201 NME6 non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase) [Source:HGNC Symbol;Acc:20567] zzz999 55093 WDYHV1 WDYHV motif containing 1 [Source:HGNC Symbol;Acc:25490] zzz999 83940 TATDN1 TatD DNase domain containing 1 [Source:HGNC Symbol;Acc:24220] T 9831 ZNF623 zinc finger protein 623 [Source:HGNC Symbol;Acc:29084] zzz999 9897 KIAA0196 KIAA0196 [Source:HGNC Symbol;Acc:28984] zzz999 26521 TIMM8B translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:HGNC Symbol;Acc:11818] zzz999 130355 C2orf76 chromosome 2 open reading frame 76 [Source:HGNC Symbol;Acc:27017] zzz999 9874 TLK1 tousled-like kinase 1 [Source:HGNC Symbol;Acc:11841] T 7553 ZNF7 zinc finger protein 7 [Source:HGNC Symbol;Acc:13139] zzz999 55270 NUDT15 nudix (nucleoside diphosphate linked moiety X)-type motif 15 [Source:HGNC Symbol;Acc:23063] T 55972 SLC25A40 solute carrier family 25, member 40 [Source:HGNC Symbol;Acc:29680] zzz999 56704 JPH1 junctophilin 1 [Source:HGNC Symbol;Acc:14201] P T 5781 PTPN11 protein tyrosine phosphatase, non-receptor type 11 [Source:HGNC Symbol;Acc:9644] P T 7884 SLBP stem-loop binding protein [Source:HGNC Symbol;Acc:10904] P T 51101 FAM164A family with sequence similarity 164, member A [Source:HGNC Symbol;Acc:24277] zzz999 51633 OTUD6B OTU domain containing 6B [Source:HGNC Symbol;Acc:24281] zzz999 79581 GPR172A G protein-coupled receptor 172A [Source:HGNC Symbol;Acc:30224] zzz999 133686 C5orf33 chromosome 5 open reading frame 33 [Source:HGNC Symbol;Acc:26404] T 140838 NANP N-acetylneuraminic acid phosphatase [Source:HGNC Symbol;Acc:16140] T 3217 HOXB7 homeobox B7 [Source:HGNC Symbol;Acc:5118] zzz999 7264 TSTA3 tissue specific transplantation antigen P35B [Source:HGNC Symbol;Acc:12390] zzz999 26589 MRPL46 mitochondrial ribosomal protein L46 [Source:HGNC Symbol;Acc:1192] zzz999 10282 BET1 blocked early in transport 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:14562] T 5862 RAB2A RAB2A, member RAS oncogene family [Source:HGNC Symbol;Acc:9763] zzz999 10987 COPS5 COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis) [Source:HGNC Symbol;Acc:2240] zzz999 3612 IMPA1 inositol(myo)-1(or 4)-monophosphatase 1 [Source:HGNC Symbol;Acc:6050] T 60561 RINT1 RAD50 interactor 1 [Source:HGNC Symbol;Acc:21876] zzz999 51001 MTERFD1 MTERF domain containing 1 [Source:HGNC Symbol;Acc:24258] zzz999 9791 PTDSS1 phosphatidylserine synthase 1 [Source:HGNC Symbol;Acc:9587] zzz999 93594 WDR67 WD repeat domain 67 [Source:HGNC Symbol;Acc:30888] T 84955 NUDCD1 NudC domain containing 1 [Source:HGNC Symbol;Acc:24306] T 10434 LYPLA1 lysophospholipase I [Source:HGNC Symbol;Acc:6737] P T 8894 EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa [Source:HGNC Symbol;Acc:3266] zzz999 389677 RBM12B RNA binding motif protein 12B [Source:HGNC Symbol;Acc:32310] P T 51184 GPN3 GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:30186] zzz999 9650 MTFR1 mitochondrial fission regulator 1 [Source:HGNC Symbol;Acc:29510] T 5701 PSMC2 proteasome (prosome, macropain) 26S subunit, ATPase, 2 [Source:HGNC Symbol;Acc:9548] zzz999 85437 ZCRB1 zinc finger CCHC-type and RNA binding motif 1 [Source:HGNC Symbol;Acc:29620] T 80124 VCPIP1 valosin containing protein (p97)/p47 complex interacting protein 1 [Source:HGNC Symbol;Acc:30897] P T 55656 INTS8 integrator complex subunit 8 [Source:HGNC Symbol;Acc:26048] zzz999 56256 SERTAD4 SERTA domain containing 4 [Source:HGNC Symbol;Acc:25236] P T 51136 RNFT1 ring finger protein, transmembrane 1 [Source:HGNC Symbol;Acc:30206] P T 157378 TMEM65 transmembrane protein 65 [Source:HGNC Symbol;Acc:25203] T 8323 FZD6 frizzled homolog 6 (Drosophila) [Source:HGNC Symbol;Acc:4044] P T 114569 zzz999 zzz999 T 25913 POT1 protection of telomeres 1 homolog (S. pombe) [Source:HGNC Symbol;Acc:17284] zzz999 65265 C8orf33 chromosome 8 open reading frame 33 [Source:HGNC Symbol;Acc:26104] T 4719 NDUFS1 NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase) [Source:HGNC Symbol;Acc:7707] T 51026 GOLT1B golgi transport 1B [Source:HGNC Symbol;Acc:20175] T 28998 MRPL13 mitochondrial ribosomal protein L13 [Source:HGNC Symbol;Acc:14278] zzz999 6921 TCEB1 transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) [Source:HGNC Symbol;Acc:11617] zzz999 84138 SLC7A6OS solute carrier family 7, member 6 opposite strand [Source:HGNC Symbol;Acc:25807] zzz999 51283 BFAR bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:17613] T 7582 ZNF33B zinc finger protein 33B [Source:HGNC Symbol;Acc:13097] T 81034 SLC25A32 solute carrier family 25, member 32 [Source:HGNC Symbol;Acc:29683] T 60526 C2orf43 chromosome 2 open reading frame 43 [Source:HGNC Symbol;Acc:26145] zzz999 3646 EIF3E eukaryotic translation initiation factor 3, subunit E [Source:HGNC Symbol;Acc:3277] P T 54968 TMEM70 transmembrane protein 70 [Source:HGNC Symbol;Acc:26050] T 8655 DYNLL1 dynein, light chain, LC8-type 1 [Source:HGNC Symbol;Acc:15476] zzz999 55074 zzz999 Oxidation resistance protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8N573] T 29929 ALG6 asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:23157] zzz999 1737 DLAT dihydrolipoamide S-acetyltransferase [Source:HGNC Symbol;Acc:2896] T 6713 SQLE squalene epoxidase [Source:HGNC Symbol;Acc:11279] zzz999 253943 zzz999 zzz999 T 3336 HSPE1 heat shock 10kDa protein 1 (chaperonin 10) [Source:HGNC Symbol;Acc:5269] zzz999

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